With regard to your extensive list of nanotechnology in SF, here are a couple of additions:
Film:
Grid Runners, a very bad Virtuosity rip-off from a couple of years ago, with
Turhan Bey and Michael Dorn. Even worse than the film it rips off, but the
villain is constructed from nanites.
Book:
Space Precinct Vol.1: The Deity-Father by David Bischoff. A TV tie-in in
which, again, the villain is (almost incidentally) a nano-construct. An
original novel, rather than an episode adaptation.
Hope this is of some help.
Mike Simpson
SFX